From a4c0fd1d307ccd657c3ab3efb27fab59b8e62ef1 Mon Sep 17 00:00:00 2001
From: Reiner Jung <reiner.jung@email.uni-kiel.de>
Date: Fri, 23 Jun 2023 18:51:32 +0200
Subject: [PATCH] Minor fixes.

---
 models/mitgcm/prepare-models-for-inspection.sh | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/models/mitgcm/prepare-models-for-inspection.sh b/models/mitgcm/prepare-models-for-inspection.sh
index 19b7d18..4d954cc 100755
--- a/models/mitgcm/prepare-models-for-inspection.sh
+++ b/models/mitgcm/prepare-models-for-inspection.sh
@@ -42,7 +42,7 @@ for JOB_DIRECTORY in `find "${OPTIMIZATION_DATA}/jss"* -name '*mitgcm*job'` ; do
 	cd "${JOB_DIRECTORY}"
 
 	if [ -f "med-output.csv" ] ; then
-		cat "${BASE_DIR}/template.project" | sed "s/NAME/$NAME-original/g" > "${JOB_DIRECTORY}/original-model/.project"
+		cat "${BASE_DIR}/template.project" | sed "s/NAME/$NAME-original/g" > "original-model/.project"
 
 		for J in `cat "med-output.csv" | sed 's/;/\t/g' | awk '{ print $3","$1","$2 }' | sed 's/^\([0-9],\)/00\1/'  | sed 's/^\([0-9]\{2\},\)/0\1/' | sort` ; do
 			ORIGINAL=`echo "$J" | cut -d, -f2 | sed 's/"//g'`
@@ -51,12 +51,12 @@ for JOB_DIRECTORY in `find "${OPTIMIZATION_DATA}/jss"* -name '*mitgcm*job'` ; do
 
 			echo "$ORIGINAL -> $OPTIMIZED in $STEPS"
 
-			cat "${BASE_DIR}/template.project" | sed "s/NAME/${MODEL_ID}-$OPTIMIZED/g" > "${JOB_DIRECTORY}/$OPTIMIZED/.project"
+			cat "${BASE_DIR}/template.project" | sed "s/NAME/${MODEL_ID}-$OPTIMIZED/g" > "$OPTIMIZED/.project"
 
-			rm -rf "${JOB_DIRECTORY}/merge-${OPTIMIZED}"
-			mkdir "${JOB_DIRECTORY}/merge-${OPTIMIZED}"
+			rm -rf "merge-${OPTIMIZED}"
+			mkdir "merge-${OPTIMIZED}"
 
-			${MOP} -e ${MODEL_ID}-$OPTIMIZED-merged -i "original-model" "${OPTIMIZED}" -o "merge-${OPTIMIZED}" -s all merge
+			"${MOP}" -e "${MODEL_ID}-$OPTIMIZED-merged" -i "original-model" "${OPTIMIZED}" -o "merge-${OPTIMIZED}" -s all merge >> mop.log 2>&1
 		done
 	else
 		error "Missing MED output for job $BASENAME"
-- 
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