Before deploying the docker container make sure to have valid data in the data folder. Use your own code/data or use code from the verification folder in the MITgcm git repository for testing purposes (e.g. https://github.com/MITgcm/MITgcm/tree/master/verification/tutorial_barotropic_gyre).
* Deploy the container by using docker-compose
```
docker-compose up -d
```
* or using plain docker by runnning
```
docker image build -t case-study-mitgcm .
docker run -v $(pwd)/../data/:/data --name case-study-mitgcm case-study-mitgcm
```
### Without Docker
Folder: /bare
You can use build.sh to run code on your machine, use the -x flag to use example code
e.g. ./build.sh -x -i
```
OPTIONS:
-d dir location of data (mandatory)
-i install required packages
-k keep binary files
-a architecture [amd64(default), ia32]
-x use example data (WARNING: deletes the content of the data folder and replaces it with example code)
